PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHN25381.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bHLH
Protein Properties Length: 404aa    MW: 44399.8 Da    PI: 7.6901
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHN25381.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH28.33.2e-09204251455
                 HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 +h+ +Er RR++i +++  L++l+P +    +k   Ka +L + ++Y++sLq
  KHN25381.1 204 SHSLAERVRREKISERMKYLQDLVPGC----NKVAGKAGMLDEIINYVQSLQ 251
                 8*************************9....677*****************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000838.52E-10198255No hitNo description
SuperFamilySSF474597.72E-17198269IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088815.37200250IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.7E-17200267IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000102.0E-6204251IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003538.7E-10206256IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 404 aa     Download sequence    Send to blast
MLHCLNTSCS DITVLERQRE ATIKCQNHQP PYLTDFNVVF PSSSSSSSSS SSSSSSHSQG  60
LLMMCSDSSL GQVLTHSVKP DPGVWPEFGF LPAISRTCSR DGDLVSPKEN MASGKENAKK  120
RKPQNSKVVA EIDNNKDKDK RVKVTGEEGE SKVTEHHTRN KNAKSNANKN NRETSADTSK  180
GSEVQNQKPD YIHVRARRGQ ATDSHSLAER VRREKISERM KYLQDLVPGC NKVAGKAGML  240
DEIINYVQSL QRQVEFLSMK LAAVNPRLDF NIDELFAKEV FPSCAQSFPN IGIPSDMSIS  300
NNPSYLQFNS AQQLVSCCGG LINSMGISPP NMGLRTNIIS TSTVPLPETF LDSSCFAQIL  360
PSSNWEGGDF QSLYNVAFDQ GRTASFPPQP FTGLVEASNL KMEM
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0983030.0BT098303.1 Soybean clone JCVI-FLGm-23G1 unknown mRNA.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003541034.10.0PREDICTED: transcription factor bHLH63 isoform X2
SwissprotQ8GY612e-56BH063_ARATH; Transcription factor bHLH63
TrEMBLA0A0B2QUS10.0A0A0B2QUS1_GLYSO; Transcription factor bHLH63
STRINGGLYMA12G04670.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF36183463
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G34530.13e-55cryptochrome-interacting basic-helix-loop-helix 1
Publications ? help Back to Top
  1. Qi X, et al.
    Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing.
    Nat Commun, 2014. 5: p. 4340
    [PMID:25004933]